Splet17. mar. 2024 · RCSB PDB - 7M2P: Structure of the SARS-CoV-2 3CL protease in complex with inhibitor 18 Structure Summary Biological Assembly 1 3D View : Structure 1D-3D View Electron Density Validation Report Global Symmetry: Cyclic - C2 ( 3D View) Global Stoichiometry: Homo 2-mer - A2 Find Similar Assemblies Splet25. avg. 2024 · RCSB Data Extraction and Deposition Preparation Tools pdb_extract – Tools and examples for extracting mmCIF data from structure determination applications (workstation/command-line version) PointSuite – generate BIOMT and CIF symmetry records for macromolecular assemblies with point and helical symmetries
RCSB PDB Newsletter: Spring 2024
SpletThe RCSB PDB also provides a variety of tools and resources. Users can perform simple and advanced searches based on annotations relating to sequence, structure and function. These molecules are visualized, downloaded, and analyzed by users who range from students to specialized scientists. SpletPdb_extract can be used to harvest data from your fully refined coordinate file, experimental data file (e.g., structure factor file), refinement program log file, and author information template file (if available). chris peace brabners
PDB Statistics - RCSB
Splet08. feb. 2011 · RCSB PDB - 3QNO: RB69 DNA Polymerase (Y567A) Ternary Complex with dATP Opposite 3tCo Structure Summary Biological Assembly 1 3D View : Structure 1D-3D View Electron Density Validation Report Ligand Interaction Global Symmetry: Asymmetric - C1 Global Stoichiometry: Monomer - A1 Find Similar Assemblies Splet08. feb. 2011 · We determined the crystal structure of the dATP/tC (o)-containing ternary complex of the RB69pol Y567A mutant at 1.9 Å resolution and found that the incoming dATP formed two hydrogen bonds with an imino-tautomerized form of tC (o). Stabilization of the dATP/tC (o) base pair involved movement of the tC (o) backbone sugar into the … Splet14. sep. 2015 · The RCSB Protein Data Bank (PDB) represents one of the most comprehensive structural biology information databases openly available to genomics and proteomics researchers ( Berman etal., 2000 ). geographical norway herren shorts